C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple PDZ domain protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438511 MPDZ-003 ENSG00000107186 9606 - 9:13106498-13136181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000438511
Transcript ID Ovary
ENST00000438511 3.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000145 CIL_000145_0001 CGP 9:12775021-13279590
CIL_0009AW CIL_0009AW_0001 VISTA 9:13014076-13615964
CIL_000746 CIL_000746_0001 CGP 9:13105704-14398983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134726 Mpdz-011 protein_coding Mus_musculus 0 1605
ENSMUST00000107262 Mpdz-201 protein_coding Mus_musculus 0 1399
ENSMUST00000107258 Mpdz-010 protein_coding Mus_musculus 0 1399
ENSMUST00000102830 Mpdz-001 protein_coding Mus_musculus 0 1399
ENSMUST00000131418 Mpdz-006 retained_intron Mus_musculus 0 634
ENSMUST00000131547 Mpdz-014 protein_coding Mus_musculus 0 628
ENSMUST00000129732 Mpdz-004 retained_intron Mus_musculus 0 385
ENSMUST00000156441 Mpdz-007 retained_intron Mus_musculus 0 265

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