C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | LIM and calponin homology domains 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000130228  |
Limch1-005 |
ENSMUSG00000037736 |
10090 | + |
5:66745889-66953678  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00038J | CIL_00038J_0002 | CGP | 5:66676098-67057159 |
| CIL_00028N | CIL_00028N_0003 | CGP | 5:66745835-67099301 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0003779 | IEA | actin binding |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0031032 | IEA | actomyosin structure organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000313860
|
LIMCH1-001 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000446625
|
LIMCH1-010 | protein_coding | Homo_sapiens | 0 | 202 |
|
ENST00000508501
|
LIMCH1-002 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000509638
|
LIMCH1-004 | protein_coding | Homo_sapiens | 2e-26 | 124 |
|
ENST00000511424
|
LIMCH1-026 | protein_coding | Homo_sapiens | 0 | 200 |
|
ENST00000512228
|
LIMCH1-023 | processed_transcript | Homo_sapiens | 0 | 322 |
|
ENST00000512632
|
LIMCH1-006 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000512820
|
LIMCH1-007 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000512946
|
LIMCH1-005 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000513024
|
LIMCH1-003 | protein_coding | Homo_sapiens | 0 | 204 |
|
ENST00000515847
|
LIMCH1-022 | processed_transcript | Homo_sapiens | 0 | 200 |
