C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: UPF3 regulator of nonsense transcripts homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130324 Upf3b-003 ENSMUSG00000036572 10090 - X:37095676-37104523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000130324
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000130324 12.248±0.00 32.474±0.00 10.624±2.67 49.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000175 CIL_000175_0003 CGP X:37082520-37110322

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276201 UPF3B-001 protein_coding Homo_sapiens 0 941
ENST00000345865 UPF3B-002 protein_coding Homo_sapiens 0 599
ENST00000478840 UPF3B-003 processed_transcript Homo_sapiens 0 619
ENST00000619445 UPF3B-201 protein_coding Homo_sapiens 0 353

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