C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UPF3 regulator of nonsense transcripts homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619445 UPF3B-201 ENSG00000125351 9606 - X:119834482-119852971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryENST00000619445
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary
ENST00000619445 0.090±0.00 0.271±0.00 0.109±0.00 0.962±0.00 0.141±0.00 0.221±0.00 0.245±0.00 0.168±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000175 CIL_000175_0002 CGP X:119786504-119852998

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133481 Upf3b-002 processed_transcript Mus_musculus 0 793
ENSMUST00000076265 Upf3b-001 protein_coding Mus_musculus 0 793
ENSMUST00000130324 Upf3b-003 protein_coding Mus_musculus 0 353

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