C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proprotein convertase subtilisin/kexin type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130521 Pcsk4-006 ENSMUSG00000020131 10090 - 10:80321287-80323127 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverMuscleOvaryPlacentaENSMUST00000130521
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Muscle Ovary Placenta
ENSMUST00000130521 1.534±0.43 1.886±0.51 1.074±0.54 0.698±0.00 3.407±0.64 0.953±0.00 2.115±0.73 0.587±0.25 1.982±0.00 0.710±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZH CIL_0000ZH_0002 CGP 10:80318254-80329498
CIL_00066P CIL_00066P_0002 CGP 10:80321283-80336441

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300954 PCSK4-001 protein_coding Homo_sapiens 6e-34 150
ENST00000441747 PCSK4-003 retained_intron Homo_sapiens 6e-34 150
ENST00000586616 PCSK4-002 retained_intron Homo_sapiens 6e-34 150
ENST00000588195 PCSK4-006 retained_intron Homo_sapiens 4e-34 150
ENST00000591201 PCSK4-004 nonsense_mediated_decay Homo_sapiens 5e-34 150
ENST00000591303 PCSK4-012 retained_intron Homo_sapiens 1e-34 150

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