C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proprotein convertase subtilisin/kexin type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588195 PCSK4-006 ENSG00000115257 9606 - 19:1482411-1490405 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartTestisENST00000588195
Transcript ID Breast Heart Testis
ENST00000588195 0.077±0.00 0.137±0.00 40.864±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZH CIL_0000ZH_0001 CGP 19:1461143-1490752
CIL_00066P CIL_00066P_0001 CGP 19:1481428-1497927

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135071 Pcsk4-003 nonsense_mediated_decay Mus_musculus 0 878
ENSMUST00000020340 Pcsk4-001 protein_coding Mus_musculus 0 878
ENSMUST00000128653 Pcsk4-002 nonsense_mediated_decay Mus_musculus 0 878
ENSMUST00000137177 Pcsk4-004 retained_intron Mus_musculus 0 878
ENSMUST00000130521 Pcsk4-006 retained_intron Mus_musculus 4e-34 150
ENSMUST00000147132 Pcsk4-005 retained_intron Mus_musculus 4e-34 150
ENSDART00000104629 furinb-001 protein_coding Danio_rerio 0.000000000007 77

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