C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130662 Sema6c-011 ENSMUSG00000038777 10090 + 3:95168212-95170140 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryPlacentaENSMUST00000130662
Transcript ID Breast Liver Ovary Placenta
ENSMUST00000130662 13.042±0.00 0.795±0.00 5.869±0.00 4.428±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000581 CIL_000581_0003 CGP 3:95139521-95174024

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341697 SEMA6C-004 protein_coding Homo_sapiens 0 1042
ENST00000368912 SEMA6C-003 protein_coding Homo_sapiens 0 754
ENST00000368913 SEMA6C-002 protein_coding Homo_sapiens 0 1042
ENST00000368914 SEMA6C-001 protein_coding Homo_sapiens 0 1042
ENST00000485745 SEMA6C-008 processed_transcript Homo_sapiens 1e-27 126
ENST00000613223 SEMA6C-201 protein_coding Homo_sapiens 0 881
ENST00000621728 SEMA6C-202 protein_coding Homo_sapiens 0 898

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