C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transmembrane channel-like gene family 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000131606  |
Tmc6-003 |
ENSMUSG00000025572 |
10090 | - |
11:117765988-117779648  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007YS | CIL_0007YS_0002 | VISTA | 11:117565410-118167678 |
| CIL_00009V | CIL_00009V_0002 | CGP | 11:117654289-117782198 |
| CIL_0000A9 | CIL_0000A9_0002 | CGP | 11:117765988-117793110 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000306591
|
TMC6-026 | protein_coding | Homo_sapiens | 0 | 420 |
|
ENST00000322914
|
TMC6-002 | protein_coding | Homo_sapiens | 0 | 1343 |
|
ENST00000392467
|
TMC6-001 | protein_coding | Homo_sapiens | 0 | 1343 |
|
ENST00000448759
|
RP11-342M1.7-001 | processed_pseudogene | Homo_sapiens | 0 | 475 |
|
ENST00000585849
|
TMC6-018 | retained_intron | Homo_sapiens | 0 | 263 |
|
ENST00000586126
|
TMC6-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 206 |
|
ENST00000586697
|
TMC6-017 | retained_intron | Homo_sapiens | 0.0000000000006 | 79 |
|
ENST00000588087
|
TMC6-006 | retained_intron | Homo_sapiens | 0 | 756 |
|
ENST00000588792
|
TMC6-005 | retained_intron | Homo_sapiens | 0.0000000000009 | 79 |
|
ENST00000589271
|
TMC6-015 | protein_coding | Homo_sapiens | 0 | 278 |
|
ENST00000589553
|
TMC6-003 | protein_coding | Homo_sapiens | 0 | 857 |
|
ENST00000590162
|
TMC6-013 | retained_intron | Homo_sapiens | 0.0000000000005 | 79 |
|
ENST00000590602
|
TMC6-007 | protein_coding | Homo_sapiens | 0 | 1343 |
|
ENST00000591436
|
TMC6-009 | protein_coding | Homo_sapiens | 0 | 593 |
|
ENST00000591594
|
TMC6-020 | retained_intron | Homo_sapiens | 0 | 278 |
|
ENST00000592063
|
TMC6-016 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000592076
|
TMC6-021 | processed_transcript | Homo_sapiens | 5e-29 | 132 |
|
ENST00000592594
|
TMC6-010 | protein_coding | Homo_sapiens | 0 | 226 |
|
ENST00000593044
|
TMC6-004 | retained_intron | Homo_sapiens | 0 | 1343 |
