C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transmembrane channel-like 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000591436  |
TMC6-009 |
ENSG00000141524 |
9606 | - |
17:78113148-78122748  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007YS | CIL_0007YS_0001 | VISTA | 17:77940736-78544976 |
| CIL_00009V | CIL_00009V_0001 | CGP | 17:78004168-78132407 |
| CIL_0000A9 | CIL_0000A9_0001 | CGP | 17:78110458-78142968 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0005794 | IDA | Golgi apparatus |
| GO:0006811 | IEA | ion transport |
| GO:0008150 | ND | biological_process |
| GO:0016021 | IEA | integral component of membrane |
| GO:0031965 | IDA | nuclear membrane |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000026659
|
Tmc6-001 | protein_coding | Mus_musculus | 0 | 593 |
|
ENSMUST00000131606
|
Tmc6-003 | nonsense_mediated_decay | Mus_musculus | 0 | 593 |
|
ENSMUST00000148220
|
Tmc6-009 | retained_intron | Mus_musculus | 2e-31 | 141 |
