C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PHD finger protein 12 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000131680  |
Phf12-004 |
ENSMUSG00000037791 |
10090 | + |
11:78023696-78028847  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006M6 | CIL_0006M6_0002 | CGP | 11:77930800-78030539 |
| CIL_0006M3 | CIL_0006M3_0002 | CGP | 11:77982754-78037866 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | ISO | negative regulation of transcription from RNA polymerase II promoter |
| GO:0001106 | ISO | RNA polymerase II transcription corepressor activity |
| GO:0001222 | IPI | transcription corepressor binding |
| GO:0005634 | ISO | nucleus |
| GO:0016580 | ISO | Sin3 complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000332830
|
PHF12-001 | protein_coding | Homo_sapiens | 0 | 780 |
|
ENST00000378879
|
PHF12-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 686 |
|
ENST00000577226
|
PHF12-004 | protein_coding | Homo_sapiens | 0 | 440 |
|
ENST00000579036
|
PHF12-018 | protein_coding | Homo_sapiens | 0 | 327 |
|
ENST00000579563
|
PHF12-017 | processed_transcript | Homo_sapiens | 0 | 248 |
|
ENST00000582436
|
PHF12-005 | retained_intron | Homo_sapiens | 0 | 440 |
|
ENST00000582655
|
PHF12-008 | processed_transcript | Homo_sapiens | 0 | 230 |
|
ENST00000589176
|
PHF12-019 | nonsense_mediated_decay | Homo_sapiens | 0 | 399 |
