C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum amyloid A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300013 SAAL1-003 ENSG00000166788 9606 - 11:18080344-18106082 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000300013
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000300013 0.712±0.00 1.725±0.00 0.471±0.00 0.241±0.00 0.908±0.00 0.721±0.00 0.830±0.00 1.653±0.00 0.646±0.00 1.075±0.43 0.819±0.41 5.062±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041A CIL_00041A_0002 CGP 11:18017564-18106091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143082 Saal1-001 protein_coding Mus_musculus 0 1258
ENSMUST00000142381 Saal1-003 retained_intron Mus_musculus 0 1103
ENSMUST00000131747 Saal1-005 retained_intron Mus_musculus 0 610
ENSMUST00000145813 Saal1-002 retained_intron Mus_musculus 0 586
ENSMUST00000006948 Saal1-004 retained_intron Mus_musculus 0 444

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