C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum amyloid A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524803 SAAL1-001 ENSG00000166788 9606 - 11:18080292-18106091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000524803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000524803 1.567±0.00 3.270±0.00 0.551±0.00 0.648±0.00 1.043±0.00 1.627±0.19 0.594±0.34 1.416±0.00 1.840±0.00 1.769±0.00 1.047±0.00 2.271±0.37 3.054±0.65 3.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041A CIL_00041A_0002 CGP 11:18017564-18106091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143082 Saal1-001 protein_coding Mus_musculus 0 1266
ENSMUST00000142381 Saal1-003 retained_intron Mus_musculus 0 1112
ENSMUST00000131747 Saal1-005 retained_intron Mus_musculus 0 610
ENSMUST00000145813 Saal1-002 retained_intron Mus_musculus 0 586
ENSMUST00000006948 Saal1-004 retained_intron Mus_musculus 0 444

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