C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UV stimulated scaffold protein A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131752 Uvssa-002 ENSMUSG00000037355 10090 + 5:33378696-33419754 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverLungOvaryPlacentaENSMUST00000131752
Transcript ID Adrenal Bladder Brain Liver Lung Ovary Placenta
ENSMUST00000131752 0.707±0.20 0.980±0.00 0.323±0.00 0.386±0.10 0.558±0.00 1.191±0.39 0.512±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006LM CIL_0006LM_0002 CGP 5:33335572-33419754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264065 DNAJC10-001 protein_coding Homo_sapiens 0.00003 58
ENST00000264169 ORC4-201 protein_coding Homo_sapiens 0.00000000003 77
ENST00000309733 C4orf32-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000310613 SULT1B1-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000389851 UVSSA-001 protein_coding Homo_sapiens 0 785
ENST00000392857 ORC4-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000469971 TMEM182-006 processed_transcript Homo_sapiens 0.000000000003 77
ENST00000481617 TBC1D8B-003 protein_coding Homo_sapiens 0.00000000002 77
ENST00000489060 TMEM45A-007 retained_intron Homo_sapiens 0.00000000002 77
ENST00000507531 UVSSA-003 protein_coding Homo_sapiens 0 782
ENST00000511216 UVSSA-002 protein_coding Homo_sapiens 0 782
ENST00000535373 ORC4-202 protein_coding Homo_sapiens 0.00000000003 77
ENST00000536575 ORC4-203 protein_coding Homo_sapiens 0.00000000002 77
ENST00000540442 ORC4-204 protein_coding Homo_sapiens 0.00000000003 77

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