C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type II, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131910 Col2a1-008 ENSMUSG00000022483 10090 - 15:97986309-97988921 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalPlacentaENSMUST00000131910
Transcript ID Adipose Adrenal Placenta
ENSMUST00000131910 0.050±0.00 0.260±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YL CIL_0005YL_0002 CGP 15:97964229-98004695
CIL_00079B CIL_00079B_0002 CGP 15:97975602-98093744

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337299 COL2A1-008 protein_coding Homo_sapiens 0 525
ENST00000380518 COL2A1-001 protein_coding Homo_sapiens 0 525
ENST00000493991 COL2A1-007 processed_transcript Homo_sapiens 0 525

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