C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: left right determination factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132087 Lefty1-002 ENSMUSG00000038793 10090 + 1:180936871-180937810 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132087 3.504±1.01 9.599±2.86 9.851±0.00 0.498±0.17 3.811±1.17 7.970±1.83 0.717±0.21 1.028±0.35 2.423±2.41 3.347±0.11 0.197±0.00 5.841±1.59 1.217±0.88 0.491±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005S0 CIL_0005S0_0002 CGP 1:180904274-180938400

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272134 LEFTY1-001 protein_coding Homo_sapiens 0 440
ENST00000366820 LEFTY2-001 protein_coding Homo_sapiens 0 440
ENST00000420304 LEFTY2-201 protein_coding Homo_sapiens 0 440
ENST00000432920 RP4-559A3.7-001 protein_coding Homo_sapiens 0 440
ENST00000474493 LEFTY2-002 processed_transcript Homo_sapiens 0 219
ENST00000616737 LEFTY2-202 protein_coding Homo_sapiens 0 440

Loading