C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | general transcription factor III A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000132102  |
Gtf3a-003 |
ENSMUSG00000016503 |
10090 | + |
5:146948705-146955606  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004MH | CIL_0004MH_0002 | CGP | 5:146845071-146955614 |
| CIL_0008CO | CIL_0008CO_0002 | VISTA | 5:146855041-147456530 |
| CIL_00082E | CIL_00082E_0002 | VISTA | 5:146922660-147524221 |
| CIL_0000G7 | CIL_0000G7_0003 | CGP | 5:146948657-146963800 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IDA | DNA binding |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000381140
|
GTF3A-001 | protein_coding | Homo_sapiens | 0 | 832 |
|
ENST00000416942
|
GTF3AP1-001 | processed_pseudogene | Homo_sapiens | 0 | 213 |
|
ENST00000419181
|
GTF3A-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 475 |
|
ENST00000432585
|
GTF3AP6-001 | processed_pseudogene | Homo_sapiens | 0 | 254 |
|
ENST00000435781
|
GTF3A-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 534 |
|
ENST00000438571
|
GTF3A-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 315 |
|
ENST00000439403
|
GTF3A-201 | protein_coding | Homo_sapiens | 0 | 832 |
|
ENST00000466776
|
GTF3A-006 | processed_transcript | Homo_sapiens | 0 | 377 |
|
ENST00000470606
|
GTF3A-003 | processed_transcript | Homo_sapiens | 0 | 660 |
|
ENST00000493903
|
GTF3A-008 | processed_transcript | Homo_sapiens | 0 | 490 |
