C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132235 Ubap1-004 ENSMUSG00000028437 10090 + 4:41371725-41388692 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000132235
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000132235 24.462±0.00 27.428±0.00 54.625±16.73 32.445±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004U CIL_00004U_0002 CGP 4:41291300-41390525
CIL_0005IT CIL_0005IT_0002 CGP 4:41348996-41464887

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297661 UBAP1-001 protein_coding Homo_sapiens 0 412
ENST00000359544 UBAP1-002 protein_coding Homo_sapiens 0 412
ENST00000379186 UBAP1-003 protein_coding Homo_sapiens 0 196

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