C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132325 Syt6-002 ENSMUSG00000027849 10090 + 3:103575282-103635179 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverMusclePlacentaENSMUST00000132325
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Muscle Placenta
ENSMUST00000132325 0.051±0.00 0.005±0.00 1.243±0.40 0.054±0.00 0.279±0.01 0.007±0.00 0.028±0.00 0.005±0.00 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X0 CIL_0006X0_0002 CGP 3:103575231-103738001

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369547 SYT6-201 protein_coding Homo_sapiens 0 1938
ENST00000607941 SYT6-001 protein_coding Homo_sapiens 0 1670
ENST00000608203 SYT6-006 protein_coding Homo_sapiens 0 846
ENST00000609117 SYT6-007 protein_coding Homo_sapiens 0 1668
ENST00000610096 SYT6-002 nonsense_mediated_decay Homo_sapiens 0 1938
ENST00000610121 SYT6-003 nonsense_mediated_decay Homo_sapiens 0 2516
ENST00000610222 SYT6-004 protein_coding Homo_sapiens 0 1668

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