C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132443 Ppp1r1b-005 ENSMUSG00000061718 10090 + 11:98350855-98357788 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000132443
Transcript ID Adipose Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000132443 0.230±0.18 0.013±0.00 9.755±9.30 2.017±0.20 14.592±4.12 1.011±0.80 0.150±0.02 6.145±4.62 0.146±0.13 0.265±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00061T CIL_00061T_0002 CGP 11:98325415-98357796
CIL_0000TI CIL_0000TI_0003 CGP 11:98348404-98381112

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254079 PPP1R1B-001 protein_coding Homo_sapiens 0 630
ENST00000394265 PPP1R1B-005 protein_coding Homo_sapiens 0 630
ENST00000394267 PPP1R1B-002 protein_coding Homo_sapiens 0 630
ENST00000580772 PPP1R1B-011 retained_intron Homo_sapiens 8e-23 111
ENST00000580825 PPP1R1B-013 protein_coding Homo_sapiens 0 435
ENST00000582680 PPP1R1B-014 protein_coding Homo_sapiens 0 211
ENST00000583446 PPP1R1B-012 retained_intron Homo_sapiens 0 337

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