C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 1 open reading frame 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494155 C1orf50-003 ENSG00000164008 9606 + 1:42773187-42774770 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryTestisENST00000494155
Transcript ID Bladder Colon Ovary Testis
ENST00000494155 0.207±0.00 0.404±0.00 0.425±0.00 0.837±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783
CIL_0005B2 CIL_0005B2_0002 CGP 1:42746335-42794493
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144309 AU022252-003 processed_transcript Mus_musculus 1e-38 163
ENSMUST00000046260 AU022252-004 processed_transcript Mus_musculus 1e-38 163
ENSMUST00000141112 AU022252-002 protein_coding Mus_musculus 1e-38 163
ENSMUST00000132778 AU022252-001 processed_transcript Mus_musculus 1e-38 163

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