C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133158 Ttc38-002 ENSMUSG00000035944 10090 + 15:85832344-85857733 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000133158
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000133158 0.805±0.00 0.322±0.00 0.976±0.22 0.921±0.27 0.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BF CIL_0008BF_0002 VISTA 15:85812646-86415385
CIL_0007IM CIL_0007IM_0002 CGP 15:85814676-85858822
CIL_0007IN CIL_0007IN_0002 CGP 15:85832306-85876572

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381031 TTC38-001 protein_coding Homo_sapiens 0 848
ENST00000417709 TTC38-002 nonsense_mediated_decay Homo_sapiens 2e-23 113
ENST00000421359 TTC38-005 protein_coding Homo_sapiens 0 206
ENST00000451998 TTC38-006 nonsense_mediated_decay Homo_sapiens 0 329

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