C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367667 RFWD2-002 ENSG00000143207 9606 - 1:175944831-176206691 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367667
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367667 5.496±0.00 4.502±0.00 1.245±0.00 1.911±0.00 5.627±0.00 1.172±0.00 2.080±0.00 2.038±0.00 3.426±0.00 1.663±0.00 4.979±1.33 3.095±0.00 6.341±0.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076894 Rfwd2-201 protein_coding Mus_musculus 0 2278
ENSMUST00000133472 Gm6206-001 processed_pseudogene Mus_musculus 0 2087
ENSMUST00000160032 Gm16199-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000190342 RP23-293C19.3-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000121699 Gm15065-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000118977 Gm12647-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000120979 Gm15861-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000190923 RP23-133G16.5-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000189783 RP24-208N6.3-001 unprocessed_pseudogene Mus_musculus 0 243
ENSMUST00000117170 Gm14894-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000120617 Gm13396-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000121483 Gm13210-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000121678 Gm13356-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000117327 Gm14670-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000119446 Gm11794-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000119290 Gm13475-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000119659 Gm12433-001 processed_pseudogene Mus_musculus 2.8026e-45 187
ENSMUST00000120750 Gm13801-001 processed_pseudogene Mus_musculus 3e-36 158

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