C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UPF3 regulator of nonsense transcripts homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133481 Upf3b-002 ENSMUSG00000036572 10090 - X:37097450-37110322 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000133481
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000133481 1.267±0.63 1.081±0.31 1.499±0.33 1.571±0.57 0.539±0.06 0.930±0.31 1.212±0.75 2.552±0.20 2.085±0.61 0.770±0.07 1.452±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000175 CIL_000175_0003 CGP X:37082520-37110322

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276201 UPF3B-001 protein_coding Homo_sapiens 0 1110
ENST00000345865 UPF3B-002 protein_coding Homo_sapiens 0 1038
ENST00000478840 UPF3B-003 processed_transcript Homo_sapiens 0 688
ENST00000619445 UPF3B-201 protein_coding Homo_sapiens 0 793

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