C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: clathrin interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133715 Clint1-003 ENSMUSG00000006169 10090 + 11:45882397-45910625 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverENSMUST00000133715
Transcript ID Brain Breast Liver
ENSMUST00000133715 1.341±0.02 1.912±0.08 2.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AQ CIL_0005AQ_0002 CGP 11:44617317-45910625
CIL_0007N2 CIL_0007N2_0002 UCNEbase 11:44634884-45922375
CIL_00053M CIL_00053M_0002 CGP 11:45852051-45944935

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000411809 CLINT1-001 protein_coding Homo_sapiens 0 1256
ENST00000518855 CLINT1-004 retained_intron Homo_sapiens 0 1195
ENST00000521047 CLINT1-007 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000521615 CLINT1-006 protein_coding Homo_sapiens 0 449
ENST00000522381 CLINT1-008 protein_coding Homo_sapiens 0 514
ENST00000523094 CLINT1-003 protein_coding Homo_sapiens 0 1260
ENST00000523908 CLINT1-002 protein_coding Homo_sapiens 0 1256
ENST00000524306 CLINT1-005 retained_intron Homo_sapiens 0 1197
ENST00000530302 CLINT1-009 retained_intron Homo_sapiens 0 396
ENST00000530742 CLINT1-010 protein_coding Homo_sapiens 0 1258

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