C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1/BRCA2-containing complex, subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133781 Brcc3-007 ENSMUSG00000031201 10090 + X:75416716-75437991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000133781
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000133781 1.596±0.07 19.388±0.00 4.937±1.78 2.040±0.54 5.223±0.10 3.962±0.00 7.558±0.63 14.858±0.00 17.394±12.63 0.904±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LJ CIL_0003LJ_0002 CGP X:75416628-75534942

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330045 BRCC3-002 protein_coding Homo_sapiens 0 520
ENST00000340647 BRCC3-006 protein_coding Homo_sapiens 0 520
ENST00000369459 BRCC3-004 protein_coding Homo_sapiens 0 520
ENST00000369462 BRCC3-001 protein_coding Homo_sapiens 0 520
ENST00000399026 BRCC3-003 protein_coding Homo_sapiens 0 296
ENST00000399042 BRCC3-201 protein_coding Homo_sapiens 0 508
ENST00000411985 BRCC3-007 protein_coding Homo_sapiens 0 697
ENST00000453705 BRCC3-005 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000508559 RP11-844P9.3-001 processed_pseudogene Homo_sapiens 0 470
ENST00000620502 BRCC3-202 protein_coding Homo_sapiens 0 508

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