C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras and Rab interactor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133820 Rin3-004 ENSMUSG00000044456 10090 + 12:102283641-102390855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMuscleOvaryPlacentaENSMUST00000133820
Transcript ID Brain Breast Liver Muscle Ovary Placenta
ENSMUST00000133820 0.079±0.00 3.405±0.00 0.406±0.00 0.875±0.46 2.328±1.15 10.918±7.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000539 CIL_000539_0002 CGP 12:102128733-102390855
CIL_000536 CIL_000536_0002 CGP 12:102283048-102439813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216487 RIN3-001 protein_coding Homo_sapiens 0 2193
ENST00000418924 RIN3-005 processed_transcript Homo_sapiens 0 2043
ENST00000553959 RIN3-014 processed_transcript Homo_sapiens 0 320
ENST00000553992 RIN3-012 processed_transcript Homo_sapiens 0 215
ENST00000555589 RIN3-003 nonsense_mediated_decay Homo_sapiens 0 1700
ENST00000556418 RIN3-007 protein_coding Homo_sapiens 0 1299
ENST00000620541 RIN3-201 protein_coding Homo_sapiens 0 1607

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