C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras and Rab interactor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620541 RIN3-201 ENSG00000100599 9606 + 14:92513793-92688987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000620541
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000620541 9.840±0.00 2.322±0.00 2.256±0.00 2.061±0.00 4.966±0.00 5.369±0.00 3.896±3.43 5.323±0.00 3.935±0.91 5.053±1.40 3.467±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000539 CIL_000539_0001 CGP 14:92322581-92688994
CIL_000536 CIL_000536_0001 CGP 14:92513774-92748702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133820 Rin3-004 protein_coding Mus_musculus 0 1607
ENSMUST00000056950 Rin3-001 protein_coding Mus_musculus 0 1607
ENSMUST00000101114 Rin3-002 protein_coding Mus_musculus 0 466
ENSMUST00000131076 Rin3-005 processed_transcript Mus_musculus 0 241

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