C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), gamma 2, accessory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134029 Polg2-005 ENSMUSG00000020718 10090 - 11:106771044-106779473 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134029 0.617±0.00 0.786±0.05 1.214±0.00 0.765±0.44 1.957±0.71 1.858±0.52 0.593±0.06 1.011±0.32 1.101±0.46 1.881±0.15 0.266±0.11 1.703±0.31 0.704±0.27 0.624±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012N CIL_00012N_0002 CGP 11:106654217-106768794
CIL_0006GT CIL_0006GT_0002 CGP 11:106751226-106779537
CIL_00012I CIL_00012I_0002 CGP 11:106768253-106789185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003887 IDA DNA-directed DNA polymerase activity
GO:0005739 IDA mitochondrion
GO:0006260 IC DNA replication
GO:0006281 TAS DNA repair
GO:0071897 IDA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000539111 POLG2-001 protein_coding Homo_sapiens 0 750
ENST00000577506 POLG2-007 processed_transcript Homo_sapiens 0 385
ENST00000578687 POLG2-005 processed_transcript Homo_sapiens 0 300
ENST00000578997 POLG2-003 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000580893 POLG2-004 processed_transcript Homo_sapiens 0 399
ENST00000581355 POLG2-006 protein_coding Homo_sapiens 0 466
ENST00000582501 POLG2-008 processed_transcript Homo_sapiens 0 353
ENST00000585104 POLG2-009 processed_transcript Homo_sapiens 6e-35 150
ENST00000585141 POLG2-002 retained_intron Homo_sapiens 0 540

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