C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PRP40 pre-mRNA processing factor 40 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134034 Prpf40b-007 ENSMUSG00000023007 10090 + 15:99314877-99316671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000134034
Transcript ID Placenta
ENSMUST00000134034 2.186±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261897 PRPF40B-002 protein_coding Homo_sapiens 0 1085
ENST00000335154 FMNL3-002 protein_coding Homo_sapiens 0 255
ENST00000380281 PRPF40B-001 protein_coding Homo_sapiens 0 1085
ENST00000546626 PRPF40B-014 retained_intron Homo_sapiens 0 274
ENST00000548825 PRPF40B-019 protein_coding Homo_sapiens 0 1064
ENST00000549547 PRPF40B-016 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000551269 PRPF40B-017 retained_intron Homo_sapiens 0 255

Loading