C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | LIM domain only 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000134961  |
Lmo4-004 |
ENSMUSG00000028266 |
10090 | - |
3:144200783-144205180  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007N8 | CIL_0007N8_0002 | UCNEbase | 3:143101318-144382743 |
| CIL_0007QF | CIL_0007QF_0002 | VISTA | 3:143613930-144215288 |
| CIL_00094A | CIL_00094A_0002 | VISTA | 3:143646946-144248485 |
| CIL_00093Y | CIL_00093Y_0002 | VISTA | 3:143682651-144283371 |
| CIL_0007XS | CIL_0007XS_0002 | VISTA | 3:143685055-144286394 |
| CIL_0008DM | CIL_0008DM_0002 | VISTA | 3:143873688-144475123 |
| CIL_00093Z | CIL_00093Z_0002 | VISTA | 3:143873814-144474949 |
| CIL_0008FW | CIL_0008FW_0002 | VISTA | 3:143894509-144496427 |
| CIL_0008P2 | CIL_0008P2_0002 | VISTA | 3:143903013-144504545 |
| CIL_0000F7 | CIL_0000F7_0002 | CGP | 3:144188530-144570181 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000145020
|
lmo4a-003 | processed_transcript | Danio_rerio | 5e-23 | 113 |
|
ENSDART00000085219
|
lmo4a-001 | protein_coding | Danio_rerio | 2e-22 | 111 |
|
ENSDART00000142875
|
lmo4a-002 | processed_transcript | Danio_rerio | 2e-21 | 108 |
|
ENST00000370542
|
LMO4-002 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000370544
|
LMO4-001 | protein_coding | Homo_sapiens | 0 | 732 |
|
ENST00000489303
|
LMO4-004 | processed_transcript | Homo_sapiens | 0 | 409 |
|
ENST00000495705
|
LMO4-003 | processed_transcript | Homo_sapiens | 0 | 405 |
