C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | AF4/FMR2 family, member 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000134963  |
Aff3-004 |
ENSMUSG00000037138 |
10090 | - |
1:38535159-38664955  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007N7 | CIL_0007N7_0003 | UCNEbase | 1:38052781-38449781 |
| CIL_000346 | CIL_000346_0002 | CGP | 1:38052787-38664955 |
| CIL_0004HL | CIL_0004HL_0002 | CGP | 1:38177326-38836090 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | TAS | sequence-specific DNA binding transcription factor activity |
| GO:0006351 | TAS | transcription, DNA-templated |
| GO:0006355 | TAS | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000317233
|
AFF3-201 | protein_coding | Homo_sapiens | 0 | 641 |
|
ENST00000409236
|
AFF3-001 | protein_coding | Homo_sapiens | 0 | 641 |
|
ENST00000409579
|
AFF3-002 | protein_coding | Homo_sapiens | 0 | 645 |
|
ENST00000416492
|
AFF3-005 | protein_coding | Homo_sapiens | 0 | 285 |
|
ENST00000423966
|
AFF3-003 | protein_coding | Homo_sapiens | 0 | 440 |
|
ENST00000424600
|
AFF3-006 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000432037
|
AFF3-014 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000440445
|
AFF3-008 | protein_coding | Homo_sapiens | 0 | 211 |
|
ENST00000441400
|
AFF3-007 | protein_coding | Homo_sapiens | 0 | 359 |
|
ENST00000498090
|
AFF3-013 | retained_intron | Homo_sapiens | 0 | 525 |
