C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AF4/FMR2 family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498090 AFF3-013 ENSG00000144218 9606 - 2:100006149-100007951 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000498090
Transcript ID Ovary
ENST00000498090 0.219±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000346 CIL_000346_0001 CGP 2:99400475-100142739
CIL_0007N7 CIL_0007N7_0002 UCNEbase 2:99405215-99899588
CIL_0004HL CIL_0004HL_0001 CGP 2:99545419-100322733

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039827 Aff3-201 protein_coding Mus_musculus 0 780
ENSMUST00000027250 Aff3-001 protein_coding Mus_musculus 0 780
ENSMUST00000095027 Aff3-002 protein_coding Mus_musculus 0 780
ENSMUST00000134963 Aff3-004 nonsense_mediated_decay Mus_musculus 0 525
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000006 60

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