C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135224 Cldn2-002 ENSMUSG00000047230 10090 + X:139806081-139809101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLungMuscleOvaryENSMUST00000135224
Transcript ID Adipose Adrenal Breast Colon Heart Lung Muscle Ovary
ENSMUST00000135224 0.308±0.27 0.114±0.00 0.170±0.01 20.812±3.83 0.096±0.00 0.379±0.19 0.047±0.00 3.045±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000174 CIL_000174_0003 CGP X:139779549-139811386

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005886 IEA plasma membrane
GO:0005923 IDA tight junction
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336803 CLDN2-001 protein_coding Homo_sapiens 0 645
ENST00000540876 CLDN2-201 protein_coding Homo_sapiens 0 649
ENST00000541806 CLDN2-202 protein_coding Homo_sapiens 0 649

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