C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336803 CLDN2-001 ENSG00000165376 9606 + X:106920404-106930861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverMuscleOvaryENST00000336803
Transcript ID Adrenal Brain Breast Kidney Liver Muscle Ovary
ENST00000336803 0.042±0.00 0.303±0.04 0.348±0.22 1.856±0.00 1.124±0.71 0.002±0.00 0.253±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000174 CIL_000174_0002 CGP X:106900063-106930861
CIL_000173 CIL_000173_0002 CGP X:106900164-107118823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005886 IEA plasma membrane
GO:0005923 ISS tight junction
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054889 Cldn2-001 protein_coding Mus_musculus 0 1094
ENSMUST00000135224 Cldn2-002 protein_coding Mus_musculus 0 645

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