C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C1D nuclear receptor co-repressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135568 C1d-004 ENSMUSG00000000581 10090 + 11:17257592-17264294 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLungOvaryENSMUST00000135568
Transcript ID Adipose Breast Colon Heart Kidney Lung Ovary
ENSMUST00000135568 3.325±0.44 2.197±0.69 1.054±0.00 1.775±0.00 3.005±0.18 1.876±0.60 1.215±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I2 CIL_0008I2_0002 VISTA 11:16884831-17492556
CIL_0007JR CIL_0007JR_0004 UCNEbase 11:17198316-19679637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355848 C1D-001 protein_coding Homo_sapiens 0 324
ENST00000407324 C1D-002 protein_coding Homo_sapiens 0 324
ENST00000409302 C1D-007 protein_coding Homo_sapiens 0 327
ENST00000410067 C1D-006 protein_coding Homo_sapiens 0 335
ENST00000418167 C1DP2-001 processed_pseudogene Homo_sapiens 0 300
ENST00000426049 C1DP1-001 processed_pseudogene Homo_sapiens 0 311
ENST00000479484 C1D-004 retained_intron Homo_sapiens 5e-39 165
ENST00000545067 CCDC7-204 protein_coding Homo_sapiens 0 292

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