C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135570 Psma1-004 ENSMUSG00000030751 10090 - 7:114264795-114276026 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartOvaryPlacentaENSMUST00000135570
Transcript ID Adrenal Brain Breast Heart Ovary Placenta
ENSMUST00000135570 15.437±1.65 7.817±0.00 41.850±38.94 11.260±0.00 25.426±8.29 27.874±9.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PO CIL_0003PO_0002 CGP 7:114215559-114276118
CIL_0003ZT CIL_0003ZT_0002 CGP 7:114264606-114539251

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396394 PSMA1-001 protein_coding Homo_sapiens 0 1123
ENST00000418988 PSMA1-002 protein_coding Homo_sapiens 0 1125
ENST00000524606 PSMA1-021 processed_transcript Homo_sapiens 0 351
ENST00000526443 PSMA1-014 retained_intron Homo_sapiens 0 477
ENST00000527632 PSMA1-020 retained_intron Homo_sapiens 0 483
ENST00000528307 PSMA1-003 retained_intron Homo_sapiens 0 475
ENST00000529524 PSMA1-018 retained_intron Homo_sapiens 2e-34 150
ENST00000530457 PSMA1-004 protein_coding Homo_sapiens 0 1125
ENST00000531023 PSMA1-007 retained_intron Homo_sapiens 0 350
ENST00000531156 PSMA1-016 retained_intron Homo_sapiens 0 479
ENST00000532256 PSMA1-010 protein_coding Homo_sapiens 4e-30 135
ENST00000533068 PSMA1-009 protein_coding Homo_sapiens 0 189
ENST00000533331 PSMA1-012 retained_intron Homo_sapiens 0 355
ENST00000555531 PSMA1-001 nonsense_mediated_decay Homo_sapiens 0 566

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