C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129084-ENSG00000152270 CGP 9606 11:14504874-14872044
GeneTranscriptPositionBiotype
ENSG00000129084 (PSMA1)
proteasome (prosome, macropain) subunit, alpha type, 1 		ENST00000396394 (PSMA1-001) 14504876-14520696 protein_coding
ENST00000418988 (PSMA1-002) 14505064-14643617 protein_coding
ENST00000524606 (PSMA1-021) 14504874-14511031 processed_transcript
ENST00000526443 (PSMA1-014) 14514342-14520072 retained_intron
ENST00000527632 (PSMA1-020) 14507587-14514002 retained_intron
ENST00000528018 (PSMA1-017) 14610854-14643635 processed_transcript
ENST00000528307 (PSMA1-003) 14504924-14520359 retained_intron
ENST00000529524 (PSMA1-018) 14513664-14517673 retained_intron
ENST00000530457 (PSMA1-004) 14504913-14520363 protein_coding
ENST00000531023 (PSMA1-007) 14510914-14514293 retained_intron
ENST00000531156 (PSMA1-016) 14514315-14520338 retained_intron
ENST00000532256 (PSMA1-010) 14517949-14520382 protein_coding
ENST00000533068 (PSMA1-009) 14517912-14520445 protein_coding
ENST00000533331 (PSMA1-012) 14513460-14520380 retained_intron
ENSG00000152270 (PDE3B)
phosphodiesterase 3B, cGMP-inhibited 		ENST00000282096 (PDE3B-001) 14643723-14872044 protein_coding
ENST00000455098 (PDE3B-002) 14643831-14869894 protein_coding
ENST00000525439 (PDE3B-004) 14788939-14819206 processed_transcript
ENST00000532740 (PDE3B-005) 14698839-14700926 processed_transcript
ENST00000534317 (PDE3B-003) 14644260-14776663 processed_transcript
ENSG00000255040 (RP11-677N16.1)
 ENST00000525966 (RP11-677N16.1-001) 14673606-14674555 processed_pseudogene
CIL_0003ZT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030751-ENSMUSG00000030671 CGP 10090 7:114264606-114539251
GeneTranscriptPositionBiotype
ENSMUSG00000030671 (Pde3b)
phosphodiesterase 3B, cGMP-inhibited 		ENSMUST00000032909 (Pde3b-001) 114415281-114539251 protein_coding
ENSMUST00000140007 (Pde3b-002) 114506178-114508463 retained_intron
ENSMUST00000149455 (Pde3b-003) 114521734-114531022 retained_intron
ENSMUSG00000030751 (Psma1)
proteasome (prosome, macropain) subunit, alpha type 1 		ENSMUST00000033008 (Psma1-001) 114264606-114276118 protein_coding
ENSMUST00000123801 (Psma1-003) 114273803-114276043 retained_intron
ENSMUST00000135570 (Psma1-004) 114264795-114276026 processed_transcript
ENSMUST00000154909 (Psma1-002) 114270489-114276054 retained_intron
ENSMUSG00000087475 (4933406I18Rik)
RIKEN cDNA 4933406I18 gene 		ENSMUST00000124673 (4933406I18Rik-001) 114354640-114415021 lincRNA
ENSMUST00000163996 (4933406I18Rik-002) 114315479-114415161 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZT_0001ENSG00000129084ENST00000396394ENST00000418988ENST00000524606ENST00000526443ENST00000527632ENST00000528018ENST00000528307ENST00000529524ENST00000530457ENST00000531023ENST00000531156ENST00000532256ENST00000533068ENST00000533331ENSG00000152270ENST00000282096ENST00000455098ENST00000525439ENST00000532740ENST00000534317ENSG00000255040ENST00000525966CIL_0003ZT_0002ENSMUSG00000030671ENSMUST00000032909ENSMUST00000140007ENSMUST00000149455ENSMUSG00000030751ENSMUST00000033008ENSMUST00000123801ENSMUST00000135570ENSMUST00000154909ENSMUSG00000087475ENSMUST00000124673ENSMUST00000163996
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZT_0001ENSG00000129084ENST00000396394ENST00000418988ENST00000531156ENSG00000152270ENST00000282096ENST00000455098ENST00000525439ENST00000532740ENST00000534317ENSG00000255040ENST00000525966CIL_0003ZT_0002ENSMUSG00000030671ENSMUST00000032909ENSMUST00000149455ENSMUSG00000030751ENSMUST00000033008ENSMUST00000135570ENSMUSG00000087475ENSMUST00000124673ENSMUST00000163996
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129084 ENST00000396394 42.884±0.00 53.084±0.00 3.517±0.00 25.329±16.34 49.482±0.00 42.320±0.00 40.872±0.00 42.542±0.00 44.989±0.00 50.328±0.00 28.182±19.75 39.936±16.84 53.168±16.19 51.011±0.00
ENST00000418988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.677±0.00
ENST00000524606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.968±0.00 N/A N/A N/A
ENST00000532256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152270 ENST00000282096 10.298±0.00 1.056±0.00 0.437±0.00 0.792±0.04 10.259±6.41 4.689±0.25 1.081±0.06 2.639±2.28 5.526±0.75 2.893±0.37 0.013±0.00 0.660±0.59 0.926±0.17 4.387±0.49
ENST00000455098 4.975±0.00 0.367±0.00 N/A N/A 7.027±3.20 N/A 0.583±0.00 4.255±0.00 N/A N/A 0.184±0.00 0.341±0.17 0.547±0.12 4.101±1.96
ENST00000525439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.097±0.00 N/A N/A N/A
ENST00000532740 0.109±0.00 0.047±0.00 N/A 0.403±0.00 3.037±0.00 N/A N/A 1.474±0.00 N/A 6.088±0.00 N/A 2.108±0.00 0.036±0.00 0.068±0.00
ENST00000534317 N/A 0.159±0.00 1.298±0.00 0.761±0.00 2.767±0.00 2.239±0.00 0.910±0.00 N/A 4.264±0.00 3.668±0.00 0.062±0.06 1.000±0.74 N/A N/A
ENSG00000255040 ENST00000525966 N/A N/A N/A 0.037±0.00 0.012±0.00 0.011±0.00 N/A 0.087±0.00 0.077±0.00 N/A N/A N/A N/A 0.131±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030671 ENSMUST00000032909 9.635±3.37 2.680±1.56 4.034±3.15 0.470±0.18 9.840±4.73 0.866±0.12 0.776±0.40 1.998±0.43 4.395±1.93 1.511±0.18 0.441±0.16 1.737±1.39 0.143±0.08 4.901±0.85
ENSMUST00000140007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149455 19.237±0.00 N/A N/A N/A 17.428±4.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030751 ENSMUST00000033008 71.157±1.98 28.962±3.95 86.195±16.36 61.103±30.22 46.725±11.10 46.819±1.81 67.937±5.77 62.979±5.20 94.459±28.88 56.890±5.31 41.975±1.72 31.039±19.76 99.216±37.07 21.567±7.73
ENSMUST00000123801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135570 N/A 15.437±1.65 N/A 7.817±0.00 41.850±38.94 N/A 11.260±0.00 N/A N/A N/A N/A 25.426±8.29 27.874±9.37 N/A
ENSMUST00000154909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087475 ENSMUST00000124673 N/A N/A 0.055±0.01 N/A 0.139±0.05 N/A 0.046±0.00 N/A 0.024±0.00 N/A N/A 0.215±0.18 0.063±0.06 3.313±0.52
ENSMUST00000163996 0.405±0.14 2.885±1.40 0.213±0.04 0.748±0.94 2.270±1.74 0.328±0.10 0.077±0.02 0.240±0.13 0.217±0.19 0.274±0.11 N/A 0.321±0.18 0.025±0.02 1.663±0.83

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