C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptogyrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135727 Syngr1-004 ENSMUSG00000022415 10090 + 15:80115473-80116265 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryTestisENSMUST00000135727
Transcript ID Colon Liver Ovary Testis
ENSMUST00000135727 5.743±2.43 0.249±0.00 8.034±0.81 0.799±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NT CIL_0003NT_0002 CGP 15:79995900-80091868
CIL_0000CB CIL_0000CB_0002 CGP 15:80077794-80119501
CIL_0000A3 CIL_0000A3_0002 CGP 15:80091334-80161701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006605 ISO protein targeting
GO:0008021 ISO synaptic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328933 SYNGR1-001 protein_coding Homo_sapiens 0 298

Loading