C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000A3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100321-ENSG00000100324 CGP 9606 22:39349925-39437060
GeneTranscriptPositionBiotype
ENSG00000100321 (SYNGR1)
synaptogyrin 1 		ENST00000216155 (SYNGR1-006) 39349949-39376033 protein_coding
ENST00000318801 (SYNGR1-002) 39349925-39378389 protein_coding
ENST00000328933 (SYNGR1-001) 39349996-39385588 protein_coding
ENST00000381535 (SYNGR1-005) 39364170-39378381 protein_coding
ENST00000406293 (SYNGR1-007) 39349991-39377075 protein_coding
ENST00000415332 (SYNGR1-003) 39349987-39377911 nonsense_mediated_decay
ENST00000489206 (SYNGR1-004) 39350006-39376210 retained_intron
ENSG00000100324 (TAB1)
TGF-beta activated kinase 1/MAP3K7 binding protein 1 		ENST00000216160 (TAB1-001) 39399741-39431882 protein_coding
ENST00000331454 (TAB1-002) 39399784-39436823 protein_coding
ENST00000461775 (TAB1-003) 39414730-39416796 retained_intron
ENST00000473491 (TAB1-008) 39421735-39428134 retained_intron
ENST00000473613 (TAB1-004) 39399778-39416849 retained_intron
ENST00000488859 (TAB1-009) 39432431-39437060 processed_transcript
ENST00000490819 (TAB1-006) 39416744-39417816 retained_intron
ENSG00000280216 (RP3-333H23.9)
 ENST00000623458 (RP3-333H23.9-001) 39379610-39380015 TEC
CIL_0000A3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022415-ENSMUSG00000022414 CGP 10090 15:80091334-80161701
GeneTranscriptPositionBiotype
ENSMUSG00000022414 (Tab1)
TGF-beta activated kinase 1/MAP3K7 binding protein 1 		ENSMUST00000023050 (Tab1-201) 80133154-80161701 protein_coding
ENSMUSG00000022415 (Syngr1)
synaptogyrin 1 		ENSMUST00000009727 (Syngr1-001) 80091344-80119501 protein_coding
ENSMUST00000009728 (Syngr1-002) 80091334-80113441 protein_coding
ENSMUST00000135727 (Syngr1-004) 80115473-80116265 protein_coding
ENSMUST00000143928 (Syngr1-003) 80097870-80111662 protein_coding
ENSMUSG00000060036 (Rpl3)
ribosomal protein L3 		ENSMUST00000081650 (Rpl3-001) 80077796-80083353 protein_coding
ENSMUST00000185306 (Rpl3-003) 80080896-80091868 protein_coding
ENSMUST00000185928 (Rpl3-005) 80081983-80083337 retained_intron
ENSMUST00000187578 (Rpl3-002) 80077795-80083353 retained_intron
ENSMUST00000187832 (Rpl3-006) 80080417-80083333 nonsense_mediated_decay
ENSMUST00000188025 (Rpl3-007) 80077794-80082583 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000A3_0001ENSG00000100321ENST00000216155ENST00000318801ENST00000328933ENST00000381535ENST00000406293ENST00000415332ENST00000489206ENSG00000100324ENST00000216160ENST00000331454ENST00000461775ENST00000473491ENST00000473613ENST00000488859ENST00000490819ENSG00000280216ENST00000623458CIL_0000A3_0002ENSMUSG00000022414ENSMUST00000023050ENSMUSG00000022415ENSMUST00000009727ENSMUST00000009728ENSMUST00000135727ENSMUST00000143928ENSMUSG00000060036ENSMUST00000081650ENSMUST00000185306ENSMUST00000185928ENSMUST00000187578ENSMUST00000187832ENSMUST00000188025
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000A3_0001ENSG00000100321ENST00000216155ENST00000318801ENST00000328933ENST00000381535ENST00000406293ENST00000415332ENST00000489206ENSG00000100324ENST00000216160ENST00000331454ENST00000473491ENSG00000280216ENST00000623458CIL_0000A3_0002ENSMUSG00000022414ENSMUST00000023050ENSMUSG00000022415ENSMUST00000009727ENSMUST00000009728ENSMUST00000135727ENSMUST00000143928ENSMUSG00000060036ENSMUST00000081650ENSMUST00000185306ENSMUST00000185928ENSMUST00000187578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100321 ENST00000216155 N/A N/A N/A N/A N/A N/A N/A 1.321±0.00 N/A N/A N/A 1.560±0.00 N/A N/A
ENST00000318801 N/A 4.027±0.00 N/A N/A 0.903±0.51 N/A 3.324±0.00 6.035±0.00 0.733±0.43 2.096±0.00 1.185±0.00 13.086±6.24 2.515±0.35 5.675±0.00
ENST00000328933 1.132±0.00 2.253±0.00 0.665±0.00 40.297±19.67 1.116±0.59 2.653±2.26 1.230±1.00 1.944±1.93 0.557±0.21 1.271±0.74 0.638±0.21 8.963±9.73 0.978±0.28 7.720±1.97
ENST00000381535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.916±0.00 N/A N/A N/A
ENST00000406293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.685±0.00 8.832±4.54 17.074±0.00
ENST00000415332 2.569±0.00 4.544±0.00 N/A N/A 2.270±0.00 3.734±3.14 5.047±4.13 N/A 0.855±0.00 3.799±0.00 3.232±2.47 11.366±10.13 7.766±1.88 8.795±0.30
ENST00000489206 N/A N/A 0.412±0.00 N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000100324 ENST00000216160 4.830±0.00 10.162±0.00 0.221±0.00 6.340±5.14 4.101±2.78 5.088±0.00 2.754±2.55 2.582±1.15 2.736±2.06 2.738±1.44 3.960±3.34 9.547±6.37 10.384±1.49 9.910±0.21
ENST00000331454 N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A 1.717±0.00 1.465±0.00 N/A N/A
ENST00000461775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473491 N/A N/A N/A N/A N/A N/A N/A 2.558±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280216 ENST00000623458 0.043±0.00 0.606±0.00 N/A 1.163±0.43 0.835±0.00 0.240±0.00 0.259±0.00 0.613±0.00 1.362±0.00 0.238±0.00 N/A 2.635±1.18 N/A 0.375±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022414 ENSMUST00000023050 6.293±1.24 8.318±1.77 14.194±1.36 12.173±4.41 7.788±3.07 14.863±2.61 8.608±0.49 10.813±1.01 5.245±3.99 8.743±0.32 5.272±0.81 11.687±5.07 5.862±1.45 1.293±0.33
ENSMUSG00000022415 ENSMUST00000009727 0.596±0.10 6.537±0.84 4.889±0.21 27.567±21.80 1.434±0.22 2.360±0.22 2.434±0.20 6.181±0.52 0.271±0.20 2.115±0.12 1.490±0.10 1.980±0.65 1.812±0.84 0.368±0.09
ENSMUST00000009728 12.691±0.75 16.003±6.31 26.184±3.13 N/A 15.694±6.86 2.269±0.40 79.434±9.50 23.117±1.88 4.684±4.93 10.343±3.06 31.300±2.71 10.558±3.75 41.327±14.59 1.983±0.84
ENSMUST00000135727 N/A N/A N/A N/A N/A 5.743±2.43 N/A N/A 0.249±0.00 N/A N/A 8.034±0.81 N/A 0.799±0.07
ENSMUST00000143928 N/A N/A N/A N/A N/A N/A N/A N/A 0.536±0.06 N/A N/A N/A N/A N/A
ENSMUSG00000060036 ENSMUST00000081650 253.682±112.93 99.735±13.57 532.379±33.72 280.723±24.20 241.286±21.82 266.586±16.79 71.879±5.35 218.130±21.60 319.458±243.07 203.548±10.97 26.381±6.97 451.027±145.18 371.085±194.89 43.744±6.42
ENSMUST00000185306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.349±0.00
ENSMUST00000185928 N/A 571.789±93.83 N/A N/A 142.993±0.00 282.752±55.43 N/A N/A 139.154±16.91 132.439±15.88 N/A 523.444±116.39 N/A N/A
ENSMUST00000187578 N/A N/A N/A N/A N/A N/A N/A N/A 58.052±5.09 N/A N/A N/A N/A N/A
ENSMUST00000187832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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