C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family F (GCN20), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135861 Abcf3-002 ENSMUSG00000003234 10090 + 16:20559344-20560270 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastENSMUST00000135861
Transcript ID Adrenal Breast
ENSMUST00000135861 10.416±1.13 7.931±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G2 CIL_0005G2_0002 CGP 16:20535478-20561379
CIL_0005FP CIL_0005FP_0002 CGP 16:20548577-20605377

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292808 ABCF3-002 protein_coding Homo_sapiens 0 379
ENST00000429586 ABCF3-001 protein_coding Homo_sapiens 0 379
ENST00000466742 ABCF3-008 retained_intron Homo_sapiens 0 385
ENST00000468892 ABCF3-007 retained_intron Homo_sapiens 0 385
ENST00000473311 ABCF3-003 retained_intron Homo_sapiens 0 379
ENST00000480539 ABCF3-018 retained_intron Homo_sapiens 2e-27 126
ENST00000480562 ABCF3-009 retained_intron Homo_sapiens 0 379

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