C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930544D05 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135865 4930544D05Rik-002 ENSMUSG00000087279 10090 + 11:70615897-70616890 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungTestisENSMUST00000135865
Transcript ID Brain Breast Kidney Liver Lung Testis
ENSMUST00000135865 0.080±0.00 0.204±0.00 0.104±0.00 0.033±0.00 0.060±0.00 12.378±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R8 CIL_0001R8_0002 CGP 11:70562881-70619216
CIL_0000P4 CIL_0000P4_0002 CGP 11:70614883-70619216
CIL_0004WF CIL_0004WF_0002 CGP 11:70615848-70642036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381365 C17orf107-001 protein_coding Homo_sapiens 0 235
ENST00000521575 C17orf107-002 protein_coding Homo_sapiens 0 222

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