C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 17 open reading frame 107
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381365 C17orf107-001 ENSG00000205710 9606 + 17:4899536-4902932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000381365
Transcript ID Liver
ENST00000381365 2.876±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R8 CIL_0001R8_0001 CGP 17:4833388-4903074
CIL_0000P4 CIL_0000P4_0001 CGP 17:4897774-4903074
CIL_0004WF CIL_0004WF_0001 CGP 17:4899418-4935030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180052 4930544D05Rik-004 protein_coding Mus_musculus 0 368
ENSMUST00000144960 4930544D05Rik-003 protein_coding Mus_musculus 0 346
ENSMUST00000135865 4930544D05Rik-002 nonsense_mediated_decay Mus_musculus 0 235
ENSMUST00000125387 4930544D05Rik-001 retained_intron Mus_musculus 0 222
ENSMUST00000189392 Chrng-004 retained_intron Mus_musculus 0.00000003 66
ENSMUST00000186038 Chrng-003 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000027470 Chrng-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000185763 Chrng-002 protein_coding Mus_musculus 0.00000003 66

Loading