C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: eukaryotic translation initiation factor 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135876 Eif2a-002 ENSMUSG00000027810 10090 + 3:58526043-58555644 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSMUST00000135876
Transcript ID Heart
ENSMUST00000135876 3.436±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QY CIL_0002QY_0002 CGP 3:58415689-58525873
CIL_0004SR CIL_0004SR_0003 CGP 3:58521969-58557501
CIL_0002IA CIL_0002IA_0002 CGP 3:58525821-58593133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006412 IDA translation
GO:0006468 IDA protein phosphorylation
GO:0009967 IDA positive regulation of signal transduction
GO:0032933 IDA SREBP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273435 EIF2A-004 protein_coding Homo_sapiens 0 1725
ENST00000406576 EIF2A-003 protein_coding Homo_sapiens 0 1391
ENST00000460851 EIF2A-001 protein_coding Homo_sapiens 0 1725
ENST00000462221 EIF2A-013 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000463863 EIF2A-006 retained_intron Homo_sapiens 0 239
ENST00000465535 EIF2A-015 protein_coding Homo_sapiens 0 1118
ENST00000469331 EIF2A-011 retained_intron Homo_sapiens 0 233
ENST00000472926 EIF2A-014 retained_intron Homo_sapiens 0 313
ENST00000473499 EIF2A-007 retained_intron Homo_sapiens 3e-36 156
ENST00000474505 EIF2A-009 retained_intron Homo_sapiens 0 339
ENST00000477551 EIF2A-005 nonsense_mediated_decay Homo_sapiens 0 1192
ENST00000482093 EIF2A-010 protein_coding Homo_sapiens 0 339
ENST00000487799 EIF2A-002 protein_coding Homo_sapiens 0 1796
ENST00000490505 EIF2A-012 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000494558 EIF2A-008 nonsense_mediated_decay Homo_sapiens 0 645

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