C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | nucleoporin 85 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000135893  |
Nup85-005 |
ENSMUSG00000020739 |
10090 | + |
11:115564525-115569891  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PW | CIL_0008PW_0002 | VISTA | 11:115369788-115971497 |
| CIL_0007IA | CIL_0007IA_0002 | CGP | 11:115523102-115583985 |
| CIL_0007IW | CIL_0007IW_0002 | CGP | 11:115564434-115604051 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000245544
|
NUP85-001 | protein_coding | Homo_sapiens | 0 | 560 |
|
ENST00000449421
|
NUP85-003 | processed_transcript | Homo_sapiens | 0 | 424 |
|
ENST00000577208
|
NUP85-010 | processed_transcript | Homo_sapiens | 0 | 560 |
|
ENST00000579298
|
NUP85-004 | protein_coding | Homo_sapiens | 0 | 560 |
|
ENST00000579324
|
NUP85-002 | protein_coding | Homo_sapiens | 0 | 424 |
|
ENST00000581104
|
NUP85-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 566 |
|
ENST00000583548
|
NUP85-009 | processed_transcript | Homo_sapiens | 0 | 508 |
|
ENST00000583569
|
NUP85-008 | protein_coding | Homo_sapiens | 0 | 453 |
|
ENST00000583948
|
NUP85-015 | processed_transcript | Homo_sapiens | 0 | 560 |
