C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: enhancer of mRNA decapping 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574770 EDC4-005 ENSG00000038358 9606 + 16:67876485-67879779 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryENST00000574770
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000574770 1.164±0.00 2.450±0.00 3.919±0.00 4.155±0.00 1.569±0.46 4.603±0.00 4.808±0.00 4.595±0.00 4.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FS CIL_0007FS_0001 CGP 16:67846732-67884503
CIL_0007FU CIL_0007FU_0001 CGP 16:67873023-67888855

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119261 Edc4-002 protein_coding Mus_musculus 0 1567
ENSMUST00000040254 Edc4-001 protein_coding Mus_musculus 0 1567
ENSMUST00000139154 Edc4-004 retained_intron Mus_musculus 0 560
ENSMUST00000136048 Edc4-003 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000132680 Edc4-006 protein_coding Mus_musculus 0 274
ENSMUST00000145618 Edc4-005 protein_coding Mus_musculus 0 259

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