C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136277 Cited1-004 ENSMUSG00000051159 10090 - X:102247886-102251918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungOvaryPlacentaENSMUST00000136277
Transcript ID Brain Colon Lung Ovary Placenta
ENSMUST00000136277 1.117±0.00 0.554±0.00 0.100±0.00 8.802±0.00 310.482±205.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YL CIL_0000YL_0003 CGP X:102184941-102252181
CIL_0006RM CIL_0006RM_0002 CGP X:102247381-102505359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0005634 IEA nucleus
GO:0060711 IMP labyrinthine layer development
GO:0060712 IMP spongiotrophoblast layer development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246139 CITED1-002 protein_coding Homo_sapiens 0 241
ENST00000373619 CITED1-001 protein_coding Homo_sapiens 0 241
ENST00000417400 CITED1-007 protein_coding Homo_sapiens 0 241
ENST00000427412 CITED1-006 protein_coding Homo_sapiens 0 241
ENST00000429794 CITED1-008 protein_coding Homo_sapiens 2.94273e-44 182
ENST00000431381 CITED1-201 protein_coding Homo_sapiens 0 241
ENST00000439980 PIN4-006 nonsense_mediated_decay Homo_sapiens 8e-27 124
ENST00000445983 CITED1-202 protein_coding Homo_sapiens 0 241
ENST00000450875 CITED1-005 protein_coding Homo_sapiens 0 241
ENST00000453707 CITED1-003 protein_coding Homo_sapiens 0 241
ENST00000454225 CITED1-004 protein_coding Homo_sapiens 1.96182e-44 183

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