C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125931-ENSG00000147099 CGP 9606 X:72301638-72573103
GeneTranscriptPositionBiotype
ENSG00000102309 (PIN4)
protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) 		ENST00000218432 (PIN4-002) 72181676-72198337 protein_coding
ENST00000373662 (PIN4-004) 72181353-72197101 nonsense_mediated_decay
ENST00000373669 (PIN4-001) 72181679-72198344 protein_coding
ENST00000423432 (PIN4-201) 72181676-72263964 protein_coding
ENST00000439980 (PIN4-006) 72181765-72302926 nonsense_mediated_decay
ENST00000446576 (PIN4-003) 72181794-72197354 protein_coding
ENST00000496835 (PIN4-005) 72181765-72263126 protein_coding
ENSG00000147099 (HDAC8)
histone deacetylase 8 		ENST00000373554 (HDAC8-005) 72567585-72572853 protein_coding
ENST00000373556 (HDAC8-003) 72567582-72572813 protein_coding
ENST00000373559 (HDAC8-008) 72474535-72572812 protein_coding
ENST00000373560 (HDAC8-007) 72474411-72572824 protein_coding
ENST00000373568 (HDAC8-006) 72351826-72573053 protein_coding
ENST00000373571 (HDAC8-004) 72466698-72572843 protein_coding
ENST00000373573 (HDAC8-001) 72329516-72573103 protein_coding
ENST00000373583 (HDAC8-010) 72329516-72572837 protein_coding
ENST00000373589 (HDAC8-201) 72329517-72573103 protein_coding
ENST00000412342 (HDAC8-013) 72464668-72572770 nonsense_mediated_decay
ENST00000415409 (HDAC8-012) 72462033-72572776 protein_coding
ENST00000421523 (HDAC8-009) 72495194-72572627 protein_coding
ENST00000436675 (HDAC8-017) 72462011-72572858 nonsense_mediated_decay
ENST00000439122 (HDAC8-002) 72473416-72573048 protein_coding
ENST00000444609 (HDAC8-015) 72568755-72573079 nonsense_mediated_decay
ENST00000470998 (HDAC8-011) 72330832-72462444 processed_transcript
ENST00000478743 (HDAC8-016) 72490934-72572843 processed_transcript
ENST00000486704 (HDAC8-014) 72571946-72572816 retained_intron
ENSG00000222810 (RNU2-68P)
RNA, U2 small nuclear 68, pseudogene 		ENST00000410878 (RNU2-68P-201) 72376979-72377169 snRNA
CIL_0006RM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051159-ENSMUSG00000067567 CGP 10090 X:102247381-102505359
GeneTranscriptPositionBiotype
ENSMUSG00000051159 (Cited1)
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 		ENSMUST00000050551 (Cited1-001) 102247381-102252181 protein_coding
ENSMUST00000101336 (Cited1-002) 102247404-102251852 protein_coding
ENSMUST00000130589 (Cited1-003) 102247821-102250775 protein_coding
ENSMUST00000134887 (Cited1-005) 102247714-102250946 protein_coding
ENSMUST00000136277 (Cited1-004) 102247886-102251918 protein_coding
ENSMUSG00000067567 (Hdac8)
histone deacetylase 8 		ENSMUST00000087916 (Hdac8-001) 102284639-102505359 protein_coding
ENSMUST00000137785 (Hdac8-002) 102414345-102505345 processed_transcript
ENSMUST00000148481 (Hdac8-003) 102407602-102505146 processed_transcript
ENSMUST00000154024 (Hdac8-005) 102498156-102504741 retained_intron
ENSMUST00000154872 (Hdac8-004) 102405647-102505081 nonsense_mediated_decay
ENSMUSG00000085568 (Gm14858)
predicted gene 14858 		ENSMUST00000138614 (Gm14858-001) 102252651-102257689 processed_transcript
ENSMUST00000144761 (Gm14858-002) 102252522-102365498 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RM_0001ENSG00000102309ENST00000218432ENST00000373662ENST00000373669ENST00000423432ENST00000439980ENST00000446576ENST00000496835ENSG00000147099ENST00000373554ENST00000373556ENST00000373559ENST00000373560ENST00000373568ENST00000373571ENST00000373573ENST00000373583ENST00000373589ENST00000412342ENST00000415409ENST00000421523ENST00000436675ENST00000439122ENST00000444609ENST00000470998ENST00000478743ENST00000486704ENSG00000222810ENST00000410878CIL_0006RM_0002ENSMUSG00000051159ENSMUST00000050551ENSMUST00000101336ENSMUST00000130589ENSMUST00000134887ENSMUST00000136277ENSMUSG00000067567ENSMUST00000087916ENSMUST00000137785ENSMUST00000148481ENSMUST00000154024ENSMUST00000154872ENSMUSG00000085568ENSMUST00000138614ENSMUST00000144761
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RM_0001ENSG00000102309ENST00000218432ENST00000373669ENST00000423432ENST00000439980ENST00000446576ENSG00000147099ENST00000373554ENST00000373556ENST00000373559ENST00000373568ENST00000373571ENST00000373573ENST00000373583ENST00000373589ENST00000412342ENST00000415409ENST00000436675ENST00000439122ENST00000444609ENSG00000222810ENST00000410878CIL_0006RM_0002ENSMUSG00000051159ENSMUST00000050551ENSMUST00000101336ENSMUST00000130589ENSMUST00000134887ENSMUST00000136277ENSMUSG00000067567ENSMUST00000087916ENSMUST00000137785ENSMUST00000148481ENSMUST00000154024ENSMUST00000154872ENSMUSG00000085568ENSMUST00000138614ENSMUST00000144761
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102309 ENST00000218432 N/A N/A 0.592±0.00 N/A N/A 0.478±0.00 N/A N/A N/A 0.458±0.00 N/A 0.327±0.00 N/A N/A
ENST00000373662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373669 3.285±0.00 4.447±0.00 N/A 4.466±0.40 3.184±1.78 4.108±2.82 1.596±0.81 3.442±2.80 2.415±1.79 1.099±0.34 1.877±0.37 4.737±2.96 6.312±1.79 5.102±1.29
ENST00000423432 N/A 1.300±0.00 N/A 1.439±0.00 N/A N/A 0.085±0.00 N/A N/A N/A N/A 0.212±0.00 N/A N/A
ENST00000439980 N/A N/A 0.346±0.00 N/A N/A 6.018±0.00 N/A 2.463±1.78 3.834±0.00 3.701±0.00 2.894±0.00 9.763±0.00 5.787±3.33 N/A
ENST00000446576 N/A N/A N/A N/A N/A N/A 0.175±0.00 N/A 0.495±0.00 0.416±0.00 N/A N/A N/A N/A
ENST00000496835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147099 ENST00000373554 N/A N/A N/A N/A N/A N/A N/A N/A 1.970±0.00 N/A N/A N/A N/A N/A
ENST00000373556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.851±0.00 N/A N/A N/A
ENST00000373559 N/A N/A N/A N/A N/A N/A N/A 5.252±0.00 N/A N/A 1.510±0.00 N/A N/A N/A
ENST00000373560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373568 N/A N/A 1.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373571 N/A N/A 1.120±0.00 N/A N/A N/A 0.406±0.00 1.271±0.00 N/A N/A N/A 1.621±0.00 N/A N/A
ENST00000373573 1.896±0.00 0.938±0.00 N/A 2.499±0.18 0.979±0.00 N/A 3.033±0.00 1.717±0.00 N/A 0.464±0.00 N/A 2.526±1.37 2.228±1.13 0.983±0.56
ENST00000373583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.598±0.00 N/A N/A N/A
ENST00000373589 N/A N/A N/A N/A N/A 1.316±0.00 N/A 3.099±0.00 N/A N/A N/A 3.673±0.00 N/A 1.345±0.00
ENST00000412342 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.444±0.00 1.446±0.00 N/A N/A N/A
ENST00000415409 N/A N/A N/A N/A 1.328±0.00 N/A N/A N/A N/A N/A N/A N/A 1.991±0.00 N/A
ENST00000421523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.893±0.00 N/A N/A N/A
ENST00000439122 1.062±0.00 2.149±0.00 N/A 1.559±0.00 0.953±0.24 N/A 0.461±0.09 0.737±0.00 0.595±0.26 0.992±0.48 N/A 1.146±0.26 0.896±0.40 0.721±0.00
ENST00000444609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.809±0.00 N/A N/A N/A
ENST00000470998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222810 ENST00000410878 0.140±0.00 0.407±0.00 N/A 1.309±0.00 15.662±0.00 N/A N/A 0.595±0.00 0.115±0.00 0.987±0.00 N/A 1.377±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051159 ENSMUST00000050551 0.700±0.55 4.349±3.43 0.163±0.06 2.164±1.28 45.951±13.54 0.226±0.13 1.301±0.44 1.019±0.48 21.401±24.35 0.110±0.07 0.177±0.09 7.004±3.51 320.058±256.62 27.451±12.14
ENSMUST00000101336 0.389±0.02 0.903±0.43 0.069±0.00 1.072±0.53 N/A 0.073±0.03 N/A 0.345±0.21 N/A 0.081±0.01 N/A 1.749±0.59 N/A N/A
ENSMUST00000130589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A
ENSMUST00000134887 N/A 2.423±0.37 N/A N/A 11.213±0.00 N/A N/A 0.523±0.00 N/A N/A 0.207±0.00 1.446±0.00 N/A N/A
ENSMUST00000136277 N/A N/A N/A 1.117±0.00 N/A 0.554±0.00 N/A N/A N/A 0.100±0.00 N/A 8.802±0.00 310.482±205.85 N/A
ENSMUSG00000067567 ENSMUST00000087916 4.431±1.15 2.040±0.62 7.036±1.19 3.951±1.05 3.664±1.13 2.357±0.89 1.422±0.21 4.118±0.55 2.005±0.59 3.210±1.05 1.417±0.17 5.033±1.21 1.820±0.67 0.472±0.00
ENSMUST00000137785 N/A 0.581±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148481 N/A 0.307±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154024 N/A 0.984±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.639±0.02 N/A N/A
ENSMUST00000154872 N/A 0.966±0.00 N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000085568 ENSMUST00000138614 N/A N/A N/A 0.026±0.00 0.069±0.00 N/A N/A N/A 0.037±0.00 N/A N/A 0.100±0.08 0.033±0.02 0.075±0.07
ENSMUST00000144761 N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A 0.134±0.08 N/A N/A N/A 0.328±0.21 0.177±0.04

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