C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000246139 CITED1-002 ENSG00000125931 9606 - X:72301650-72306987 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066A CIL_00066A_0001 CGP X:72181353-72302926
CIL_0000YL CIL_0000YL_0002 CGP X:72255679-72307187
CIL_0006RM CIL_0006RM_0001 CGP X:72301638-72573103

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 TAS metanephros development
GO:0001658 ISS branching involved in ureteric bud morphogenesis
GO:0001890 ISS placenta development
GO:0003682 ISS chromatin binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006913 IDA nucleocytoplasmic transport
GO:0006915 IEA apoptotic process
GO:0007179 IDA transforming growth factor beta receptor signaling pathway
GO:0008022 IPI protein C-terminus binding
GO:0008283 TAS cell proliferation
GO:0010628 ISS positive regulation of gene expression
GO:0030178 TAS negative regulation of Wnt signaling pathway
GO:0030318 IMP melanocyte differentiation
GO:0030511 TAS positive regulation of transforming growth factor beta receptor signaling pathway
GO:0032496 ISS response to lipopolysaccharide
GO:0032868 ISS response to insulin
GO:0034097 ISS response to cytokine
GO:0034341 ISS response to interferon-gamma
GO:0042438 ISS melanin biosynthetic process
GO:0042803 IDA protein homodimerization activity
GO:0043473 IMP pigmentation
GO:0043524 IDA negative regulation of neuron apoptotic process
GO:0043627 IDA response to estrogen
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045668 ISS negative regulation of osteoblast differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0050693 IDA LBD domain binding
GO:0051591 ISS response to cAMP
GO:0060231 TAS mesenchymal to epithelial transition
GO:0060395 IDA SMAD protein signal transduction
GO:0070410 IPI co-SMAD binding
GO:0070555 ISS response to interleukin-1
GO:0070669 ISS response to interleukin-2
GO:0070670 ISS response to interleukin-4
GO:0070741 ISS response to interleukin-6
GO:0071104 ISS response to interleukin-9
GO:0071105 ISS response to interleukin-11
GO:0071107 ISS response to parathyroid hormone
GO:0071559 IDA response to transforming growth factor beta

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101336 Cited1-002 protein_coding Mus_musculus 0 734
ENSMUST00000050551 Cited1-001 protein_coding Mus_musculus 0 571
ENSMUST00000134887 Cited1-005 protein_coding Mus_musculus 0 355
ENSMUST00000130589 Cited1-003 protein_coding Mus_musculus 0 281
ENSMUST00000136277 Cited1-004 protein_coding Mus_musculus 0 241
ENSDART00000109055 cited1-201 protein_coding Danio_rerio 8e-40 169

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