C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10086
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136334 Gm10086-001 ENSMUSG00000060730 10090 + 5:108517179-108517532 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartLiverOvaryPlacentaENSMUST00000136334
Transcript ID Adipose Adrenal Bladder Breast Heart Liver Ovary Placenta
ENSMUST00000136334 0.386±0.00 0.321±0.00 0.136±0.00 2.534±2.25 0.163±0.00 0.127±0.05 0.831±0.18 0.191±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LT CIL_0006LT_0002 CGP 5:108461232-108550024

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394665 RPL34-002 protein_coding Homo_sapiens 0 470
ENST00000394667 RPL34-001 protein_coding Homo_sapiens 0 470
ENST00000394668 RPL34-003 protein_coding Homo_sapiens 0 470
ENST00000428810 RPL34P27-001 processed_pseudogene Homo_sapiens 0 375
ENST00000445636 RPL34P26-001 processed_pseudogene Homo_sapiens 0 366
ENST00000450455 RPL34P1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000456162 RP11-58A11.2-001 processed_pseudogene Homo_sapiens 0 261
ENST00000465389 RPL34P34-001 processed_pseudogene Homo_sapiens 0 381
ENST00000466686 RP1-181J22.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000473936 CTB-2L9.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000475295 RPL34P31-001 processed_pseudogene Homo_sapiens 0 335
ENST00000486062 RPL34P33-001 processed_pseudogene Homo_sapiens 0 339
ENST00000498395 RP11-841C19.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000502534 RPL34-006 protein_coding Homo_sapiens 0 470
ENST00000504231 RPL34-007 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000506397 RPL34-005 protein_coding Homo_sapiens 0 470

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