C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NOP56 ribonucleoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136621 Nop56-006 ENSMUSG00000027405 10090 + 2:130274455-130277537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaENSMUST00000136621
Transcript ID Brain Liver Ovary Placenta
ENSMUST00000136621 69.853±0.00 93.305±0.00 70.009±0.00 63.667±39.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_0000FW CIL_0000FW_0002 CGP 2:130195194-130279313
CIL_0000FV CIL_0000FV_0002 CGP 2:130274430-130284547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329276 NOP56-009 protein_coding Homo_sapiens 0 913
ENST00000445139 NOP56-016 protein_coding Homo_sapiens 0 732
ENST00000469588 NOP56-002 processed_transcript Homo_sapiens 0 891
ENST00000470143 NOP56-014 processed_transcript Homo_sapiens 0 289
ENST00000494697 NOP56-012 processed_transcript Homo_sapiens 0 285

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